Sequence-Similarity-Based Approach to SARS-CoV-2 Genome Sequence and Lung Cancer-Related Genes via Multivariate Feature Extraction Method

Yükleniyor...
Küçük Resim

Tarih

Dergi Başlığı

Dergi ISSN

Cilt Başlığı

Yayıncı

Taylor & Francis

Erişim Hakkı

info:eu-repo/semantics/closedAccess

Araştırma projeleri

Organizasyon Birimleri

Dergi sayısı

Özet

The COVID-19 pandemic has prompted genomic studies linking SARS–CoV-2 and lung cancer- related genes. This study explores sequence similarity and motif patterns to assess disease sus-ceptibility. We applied a data mining approach to compare human and SARS–CoV-2 genomes, revealing high sequence identity (0.74–0.99%) with lung cancer-related genes. Low-entropy motifs were associated with higher genetic risk. We identified shared patterns of lengths 4, 5, and 10, selecting the most significant motifs. These findings support the hypothesis that sequence similarity and conserved motifs provide insights into gene function, evolutionary proc-esses, and the genetic links between cancer and viral infections.

Açıklama

Anahtar Kelimeler

Data mining, Sequence motif, Sequence similarity

Kaynak

Computer Methods in Biomechanics and Biomedical Engineering

WoS Q Değeri

Scopus Q Değeri

Cilt

Sayı

Künye

Çevik, N., Çevik, T., Rasheed, J., Mohanty, S. N., Cakar, H. I., & Alsubai, S.. (2025). Sequence-similarity-based approach to SARS–CoV-2 genome sequence and lung cancer-related genes via multivariate feature extraction method. Computer Methods in Biomechanics and Biomedical Engineering, 1–20. https://doi.org/10.1080/10255842.2025.2530645

Onay

İnceleme

Ekleyen

Referans Veren