Sequence-Similarity-Based Approach to SARS-CoV-2 Genome Sequence and Lung Cancer-Related Genes via Multivariate Feature Extraction Method

dc.authorscopusid56747624400
dc.authorscopusid37017221000
dc.authorscopusid57791962400
dc.authorscopusid36170793300
dc.authorscopusid59987997500
dc.authorscopusid57194975731
dc.authorwosidADO-2641-2022
dc.authorwosidAAD-9934-2022
dc.authorwosidAAY-5207-2020
dc.authorwosidLTL-5164-2024
dc.authorwosidCIU-9312-2022
dc.authorwosidABW-9013-2022
dc.contributor.authorCevik, Nazife
dc.contributor.authorCevik, Taner
dc.contributor.authorRasheed, Jawad
dc.contributor.authorMohanty, Sachi Nandan
dc.contributor.authorCakar, Halil Ibrahim
dc.contributor.authorAlsubai, Shtwai
dc.contributor.authorRasheed, Jawad
dc.contributor.department-temp
dc.date.accessioned2026-06-17T10:15:54Z
dc.date.issued2025
dc.departmentMühendislik ve Doğa Bilimleri Fakültesi
dc.description.abstractThe COVID-19 pandemic has prompted genomic studies linking SARS–CoV-2 and lung cancer- related genes. This study explores sequence similarity and motif patterns to assess disease sus-ceptibility. We applied a data mining approach to compare human and SARS–CoV-2 genomes, revealing high sequence identity (0.74–0.99%) with lung cancer-related genes. Low-entropy motifs were associated with higher genetic risk. We identified shared patterns of lengths 4, 5, and 10, selecting the most significant motifs. These findings support the hypothesis that sequence similarity and conserved motifs provide insights into gene function, evolutionary proc-esses, and the genetic links between cancer and viral infections.
dc.identifier.citationÇevik, N., Çevik, T., Rasheed, J., Mohanty, S. N., Cakar, H. I., & Alsubai, S.. (2025). Sequence-similarity-based approach to SARS–CoV-2 genome sequence and lung cancer-related genes via multivariate feature extraction method. Computer Methods in Biomechanics and Biomedical Engineering, 1–20. https://doi.org/10.1080/10255842.2025.2530645
dc.identifier.doi10.1080/10255842.2025.2530645
dc.identifier.endpage20
dc.identifier.issn1025-5842
dc.identifier.issn1476-8259
dc.identifier.orcid0000-0003-3761-1641
dc.identifier.pmid40645640
dc.identifier.scopus2-s2.0-105010523062
dc.identifier.scopusqualityQ2
dc.identifier.startpage1
dc.identifier.urihttps://doi.org/10.1080/10255842.2025.2530645
dc.identifier.urihttps://hdl.handle.net/20.500.12436/9618
dc.identifier.wosWOS:001526515400001
dc.identifier.wosqualityQ3
dc.indekslendigikaynakPubMed
dc.indekslendigikaynakWeb of Science
dc.language.isoen
dc.publisherTaylor & Francis
dc.relation.ispartofComputer Methods in Biomechanics and Biomedical Engineering
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı
dc.rightsinfo:eu-repo/semantics/closedAccess
dc.subjectData mining
dc.subjectSequence motif
dc.subjectSequence similarity
dc.titleSequence-Similarity-Based Approach to SARS-CoV-2 Genome Sequence and Lung Cancer-Related Genes via Multivariate Feature Extraction Method
dc.typeArticle
dspace.entity.typePublication
relation.isAuthorOfPublicationf9b9b46c-d923-42d3-b413-dd851c2e913a
relation.isAuthorOfPublication.latestForDiscoveryf9b9b46c-d923-42d3-b413-dd851c2e913a

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